Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 DBET-201ENST00000630918 3363 ntBASIC15.96■□□□□ 0.15
VPS33AQ96AX1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 PRYP5-201ENST00000451909 266 ntBASIC15.96■□□□□ 0.15
VPS33AQ96AX1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 AC087388.1-201ENST00000571370 1112 ntBASIC15.96■□□□□ 0.15
VPS33AQ96AX1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 AL591684.3-201ENST00000605187 298 ntBASIC15.96■□□□□ 0.15
VPS33AQ96AX1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.96■□□□□ 0.15
VPS33AQ96AX1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.96■□□□□ 0.14
VPS33AQ96AX1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS33AQ96AX1 NORAD-201ENST00000565493 5339 ntBASIC15.96■□□□□ 0.14
VPS33AQ96AX1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS33AQ96AX1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 NCF1C-201ENST00000438382 1427 ntBASIC15.95■□□□□ 0.14
VPS33AQ96AX1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 AC132008.2-207ENST00000454517 770 ntBASIC15.95■□□□□ 0.14
VPS33AQ96AX1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 AL590326.2-201ENST00000625139 305 ntBASIC15.95■□□□□ 0.14
VPS33AQ96AX1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VPS33AQ96AX1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
VPS33AQ96AX1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms