Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC006058.4-201ENST00000624016 1670 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 GPR89P-201ENST00000407924 1495 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 RCN1P2-201ENST00000398357 915 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 PCED1CP-201ENST00000419887 785 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 AP002383.4-201ENST00000442518 975 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 KRT17P6-201ENST00000453795 1220 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 BNIP3P18-201ENST00000593976 575 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 AC116407.4-201ENST00000623319 1061 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 AL603832.2-201ENST00000566195 2125 ntBASIC14.71□□□□□ -0.05
RFT1Q96AA3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 AC148477.5-201ENST00000625164 1645 ntBASIC14.71□□□□□ -0.05
RFT1Q96AA3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 AC074051.2-201ENST00000565115 352 ntBASIC14.71□□□□□ -0.05
RFT1Q96AA3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFT1Q96AA3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFT1Q96AA3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 AP002414.2-201ENST00000591780 3365 ntBASIC14.71□□□□□ -0.06
RFT1Q96AA3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.71□□□□□ -0.06
RFT1Q96AA3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RFT1Q96AA3 IER3-202ENST00000376377 1350 ntBASIC14.71□□□□□ -0.06
RFT1Q96AA3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
RFT1Q96AA3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.71□□□□□ -0.06
RFT1Q96AA3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 AL596087.1-201ENST00000400979 1969 ntBASIC14.71□□□□□ -0.06
RFT1Q96AA3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RFT1Q96AA3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 INTS4P1-201ENST00000438455 1935 ntBASIC14.7□□□□□ -0.06
RFT1Q96AA3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms