Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 GGT4P-201ENST00000623672 1708 ntBASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 TERF1P3-201ENST00000505638 1227 ntBASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP6V0A1Q93050 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATP6V0A1Q93050 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ATP6V0A1Q93050 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATP6V0A1Q93050 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC142381.1-201ENST00000426099 345 ntBASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 AC080080.1-201ENST00000625121 2420 ntBASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V0A1Q93050 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 HLA-A-202ENST00000376806 1854 ntBASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MIR661-201ENST00000384842 89 ntBASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 AC092580.3-201ENST00000430932 139 ntBASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A1Q93050 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms