Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 PMS2P1-201ENST00000431037 1228 ntBASIC18.81■□□□□ 0.6
ERCC4Q92889 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC4Q92889 MPDU1-223ENST00000582151 728 ntBASIC18.81■□□□□ 0.6
ERCC4Q92889 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 AC144831.1-201ENST00000573312 2656 ntBASIC18.81■□□□□ 0.6
ERCC4Q92889 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 PI4KAP1-204ENST00000612579 1703 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC4Q92889 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 REXO1L8P-201ENST00000604378 1897 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC4Q92889 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 AKR1C7P-201ENST00000305623 895 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 ELK2BP-201ENST00000415014 1224 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 RBM17P3-201ENST00000417687 1192 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.8■□□□□ 0.6
ERCC4Q92889 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.8■□□□□ 0.6
ERCC4Q92889 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.8■□□□□ 0.6
ERCC4Q92889 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 AC008608.2-201ENST00000606089 416 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 AL589182.2-201ENST00000619332 1049 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 AC004706.3-202ENST00000621574 984 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 AL139011.1-202ENST00000642063 584 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ERCC4Q92889 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.8■□□□□ 0.6
ERCC4Q92889 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ERCC4Q92889 AL603832.2-201ENST00000566195 2125 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC4Q92889 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC4Q92889 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC4Q92889 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC4Q92889 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.8■□□□□ 0.6
ERCC4Q92889 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC4Q92889 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC4Q92889 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC4Q92889 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC4Q92889 HCG4P8-203ENST00000443049 980 ntBASIC18.79■□□□□ 0.6
ERCC4Q92889 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 MIR3652-201ENST00000579335 131 ntBASIC18.79■□□□□ 0.6
ERCC4Q92889 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 AC025062.2-201ENST00000605477 670 ntBASIC18.79■□□□□ 0.6
ERCC4Q92889 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC4Q92889 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC4Q92889 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC4Q92889 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC4Q92889 PRAL-201ENST00000624952 3286 ntBASIC18.79■□□□□ 0.6
ERCC4Q92889 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERCC4Q92889 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC4Q92889 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ERCC4Q92889 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC4Q92889 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC4Q92889 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.78■□□□□ 0.6
ERCC4Q92889 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms