Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 AC005412.3-201ENST00000580309 715 ntBASIC15.65■□□□□ 0.1
TM9SF4Q92544 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 AC009093.7-201ENST00000623853 1223 ntBASIC15.65■□□□□ 0.1
TM9SF4Q92544 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TM9SF4Q92544 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC078925.2-201ENST00000624013 1973 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AL627223.1-201ENST00000416693 442 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC092474.2-201ENST00000424288 719 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 CNN2P2-201ENST00000443536 909 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 CNN2P3-201ENST00000450201 906 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 RNA5SP421-201ENST00000516864 134 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 MIR4515-201ENST00000584082 81 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC015911.4-201ENST00000588022 1070 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AL096865.1-201ENST00000606796 927 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 AL136317.3-201ENST00000618497 906 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC092053.1-201ENST00000605787 1936 ntBASIC15.64■□□□□ 0.09
TM9SF4Q92544 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TM9SF4Q92544 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM9SF4Q92544 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 LINC02012-201ENST00000608206 1725 ntBASIC15.63■□□□□ 0.09
TM9SF4Q92544 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TM9SF4Q92544 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 SLC25A1P3-201ENST00000395415 828 ntBASIC15.63■□□□□ 0.09
TM9SF4Q92544 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.63■□□□□ 0.09
TM9SF4Q92544 ADH5P3-201ENST00000433842 1137 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms