Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.5■■□□□ 1.03
RTF1Q92541 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 AL353705.2-201ENST00000428243 662 ntBASIC21.5■■□□□ 1.03
RTF1Q92541 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.5■■□□□ 1.03
RTF1Q92541 AC097493.3-201ENST00000509725 367 ntBASIC21.5■■□□□ 1.03
RTF1Q92541 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.5■■□□□ 1.03
RTF1Q92541 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
RTF1Q92541 LINC02084-201ENST00000606069 1096 ntBASIC21.5■■□□□ 1.03
RTF1Q92541 AL390754.1-201ENST00000619088 582 ntBASIC21.5■■□□□ 1.03
RTF1Q92541 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.5■■□□□ 1.03
RTF1Q92541 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.5■■□□□ 1.03
RTF1Q92541 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
RTF1Q92541 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.5■■□□□ 1.03
RTF1Q92541 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTF1Q92541 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 PCGF3-213ENST00000620529 1899 ntBASIC21.49■■□□□ 1.03
RTF1Q92541 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.49■■□□□ 1.03
RTF1Q92541 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.49■■□□□ 1.03
RTF1Q92541 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.49■■□□□ 1.03
RTF1Q92541 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RTF1Q92541 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTF1Q92541 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTF1Q92541 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RTF1Q92541 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
RTF1Q92541 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.48■■□□□ 1.03
RTF1Q92541 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.48■■□□□ 1.03
RTF1Q92541 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.48■■□□□ 1.03
RTF1Q92541 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.48■■□□□ 1.03
RTF1Q92541 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.48■■□□□ 1.03
RTF1Q92541 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RTF1Q92541 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.48■■□□□ 1.03
RTF1Q92541 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.48■■□□□ 1.03
RTF1Q92541 AJ011932.1-201ENST00000621707 465 ntBASIC21.48■■□□□ 1.03
RTF1Q92541 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RTF1Q92541 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RTF1Q92541 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RTF1Q92541 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTF1Q92541 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.48■■□□□ 1.03
RTF1Q92541 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.47■■□□□ 1.03
RTF1Q92541 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
RTF1Q92541 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RTF1Q92541 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RTF1Q92541 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.47■■□□□ 1.03
RTF1Q92541 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.47■■□□□ 1.03
RTF1Q92541 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.47■■□□□ 1.03
RTF1Q92541 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.47■■□□□ 1.03
RTF1Q92541 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.47■■□□□ 1.03
RTF1Q92541 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
RTF1Q92541 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.47■■□□□ 1.03
RTF1Q92541 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.47■■□□□ 1.03
RTF1Q92541 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RTF1Q92541 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RTF1Q92541 HLA-A-202ENST00000376806 1854 ntBASIC21.47■■□□□ 1.03
RTF1Q92541 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTF1Q92541 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.47■■□□□ 1.03
RTF1Q92541 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms