Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NORAD-201ENST00000565493 5339 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MRPL3P1-201ENST00000400109 1033 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 KRT18P67-201ENST00000432816 1264 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 FGFR3P6-201ENST00000457012 610 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AC073648.2-201ENST00000510116 352 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 STK19B-204ENST00000512515 211 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AL603832.2-201ENST00000566195 2125 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 TP73-AS1-207ENST00000624167 988 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 AC068418.2-201ENST00000577309 3703 ntBASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB40AQ8WXH6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 AC002310.6-201ENST00000624451 1377 ntBASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 AL773604.1-201ENST00000617417 272 ntBASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 AL139011.1-202ENST00000642063 584 ntBASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB40AQ8WXH6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms