Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 RNU1-129P-201ENST00000384064 167 ntBASIC16.19■□□□□ 0.18
ATL1Q8WXF7 AC026396.1-201ENST00000419388 421 ntBASIC16.19■□□□□ 0.18
ATL1Q8WXF7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 U1.21-201ENST00000580816 167 ntBASIC16.19■□□□□ 0.18
ATL1Q8WXF7 AL031055.1-201ENST00000606362 631 ntBASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 LINC01144-201ENST00000626198 1710 ntBASIC16.19■□□□□ 0.18
ATL1Q8WXF7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 LINC00554-201ENST00000564841 3011 ntBASIC16.19■□□□□ 0.18
ATL1Q8WXF7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ATL1Q8WXF7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 AC064836.3-201ENST00000607928 673 ntBASIC16.18■□□□□ 0.18
ATL1Q8WXF7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 PCGF3-213ENST00000620529 1899 ntBASIC16.18■□□□□ 0.18
ATL1Q8WXF7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 PCDHA1-201ENST00000378133 2726 ntBASIC16.18■□□□□ 0.18
ATL1Q8WXF7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ATL1Q8WXF7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ATL1Q8WXF7 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms