Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 AL590787.1-201ENST00000568856 1315 ntBASIC17.02■□□□□ 0.32
SCG3Q8WXD2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 AC022188.1-201ENST00000620960 1664 ntBASIC17.02■□□□□ 0.32
SCG3Q8WXD2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 PRSS29P-201ENST00000440800 595 ntBASIC17.02■□□□□ 0.32
SCG3Q8WXD2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 DUX4L17-201ENST00000557360 1267 ntBASIC17.02■□□□□ 0.32
SCG3Q8WXD2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 GGTLC5P-201ENST00000617623 998 ntBASIC17.02■□□□□ 0.32
SCG3Q8WXD2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.02■□□□□ 0.32
SCG3Q8WXD2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SCG3Q8WXD2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 AC079328.2-201ENST00000561241 3354 ntBASIC17.02■□□□□ 0.31
SCG3Q8WXD2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCG3Q8WXD2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AL136379.1-201ENST00000623471 2642 ntBASIC17.01■□□□□ 0.31
SCG3Q8WXD2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AC105917.1-201ENST00000506637 2539 ntBASIC17.01■□□□□ 0.31
SCG3Q8WXD2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 RPSAP43-201ENST00000402237 625 ntBASIC17.01■□□□□ 0.31
SCG3Q8WXD2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 GPX1P2-201ENST00000429271 606 ntBASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 IGHV3-65-201ENST00000523210 341 ntBASIC17.01■□□□□ 0.31
SCG3Q8WXD2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCG3Q8WXD2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17■□□□□ 0.31
SCG3Q8WXD2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17■□□□□ 0.31
SCG3Q8WXD2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17■□□□□ 0.31
SCG3Q8WXD2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCG3Q8WXD2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCG3Q8WXD2 AC023274.1-201ENST00000418278 595 ntBASIC17■□□□□ 0.31
SCG3Q8WXD2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17■□□□□ 0.31
SCG3Q8WXD2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17■□□□□ 0.31
SCG3Q8WXD2 HNRNPA1P28-201ENST00000424481 961 ntBASIC17■□□□□ 0.31
SCG3Q8WXD2 VN2R19P-201ENST00000442399 1052 ntBASIC17■□□□□ 0.31
SCG3Q8WXD2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17■□□□□ 0.31
SCG3Q8WXD2 AC108073.2-201ENST00000464002 357 ntBASIC17■□□□□ 0.31
SCG3Q8WXD2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17■□□□□ 0.31
SCG3Q8WXD2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17■□□□□ 0.31
SCG3Q8WXD2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17■□□□□ 0.31
SCG3Q8WXD2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17■□□□□ 0.31
SCG3Q8WXD2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17■□□□□ 0.31
SCG3Q8WXD2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCG3Q8WXD2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17■□□□□ 0.31
SCG3Q8WXD2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17■□□□□ 0.31
SCG3Q8WXD2 AL805961.1-202ENST00000641562 540 ntBASIC17■□□□□ 0.31
SCG3Q8WXD2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms