Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 AC069262.1-201ENST00000539058 672 ntBASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARHGEF39Q8N4T4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 AC005622.1-201ENST00000636801 1703 ntBASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 AC005052.1-201ENST00000625181 2492 ntBASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 POU5F1P6-201ENST00000466990 990 ntBASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 RFPL4AP1-201ENST00000530883 850 ntBASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ARHGEF39Q8N4T4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 HLA-H-201ENST00000383620 1096 ntBASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AL645939.2-201ENST00000427340 991 ntBASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AC051619.7-201ENST00000568314 623 ntBASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 Z92544.3-201ENST00000624747 417 ntBASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ARHGEF39Q8N4T4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms