Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 AC098614.1-201ENST00000368528 745 ntBASIC17.53■□□□□ 0.4
RNF135Q8IUD6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.53■□□□□ 0.4
RNF135Q8IUD6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF135Q8IUD6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 AC007541.1-201ENST00000570282 1469 ntBASIC17.52■□□□□ 0.4
RNF135Q8IUD6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 MIR346-201ENST00000362234 95 ntBASIC17.52■□□□□ 0.4
RNF135Q8IUD6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 AC027307.2-201ENST00000591252 911 ntBASIC17.52■□□□□ 0.4
RNF135Q8IUD6 MIR6805-201ENST00000615055 62 ntBASIC17.52■□□□□ 0.4
RNF135Q8IUD6 AL162274.1-201ENST00000617191 1098 ntBASIC17.52■□□□□ 0.4
RNF135Q8IUD6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 IGHV3-72-202ENST00000621503 303 ntBASIC17.52■□□□□ 0.4
RNF135Q8IUD6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF135Q8IUD6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 AC022211.2-201ENST00000585075 2527 ntBASIC17.52■□□□□ 0.39
RNF135Q8IUD6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF135Q8IUD6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 WASH6P-202ENST00000359512 1437 ntBASIC17.51■□□□□ 0.39
RNF135Q8IUD6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 ACA64.2-201ENST00000459014 129 ntBASIC17.51■□□□□ 0.39
RNF135Q8IUD6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 AC140912.1-201ENST00000577171 1054 ntBASIC17.51■□□□□ 0.39
RNF135Q8IUD6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF135Q8IUD6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms