Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 AC005622.1-201ENST00000636801 1703 ntBASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 AL513480.1-201ENST00000451731 511 ntBASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 AL121894.2-201ENST00000602977 491 ntBASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE8Q86YQ8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 RPS2P28-201ENST00000314255 741 ntBASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 PRSS29P-201ENST00000440800 595 ntBASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 AP001005.1-201ENST00000571755 1248 ntBASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 AL031055.1-201ENST00000606362 631 ntBASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE8Q86YQ8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 KRT18P2-201ENST00000447938 1258 ntBASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE8Q86YQ8 AC018845.2-201ENST00000568326 409 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms