Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 AC107918.2-201ENST00000530817 355 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 PGM5P2-202ENST00000637225 1043 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 SLC22A20-204ENST00000530038 1673 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 BCRP1-201ENST00000444246 691 ntBASIC14.66□□□□□ -0.06
RTTNQ86VV8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 AC092865.6-201ENST00000642101 219 ntBASIC14.66□□□□□ -0.06
RTTNQ86VV8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RTTNQ86VV8 PCDHA1-201ENST00000378133 2726 ntBASIC14.66□□□□□ -0.06
RTTNQ86VV8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTTNQ86VV8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 CICP6-201ENST00000457191 2729 ntBASIC14.65□□□□□ -0.06
RTTNQ86VV8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 RNA5SP416-201ENST00000516838 111 ntBASIC14.65□□□□□ -0.06
RTTNQ86VV8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTTNQ86VV8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.65□□□□□ -0.06
RTTNQ86VV8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms