Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB1Q86U70 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB1Q86U70 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB1Q86U70 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB1Q86U70 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB1Q86U70 AL031432.2-201ENST00000566714 459 ntBASIC16.53■□□□□ 0.24
LDB1Q86U70 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 AL928711.1-201ENST00000570165 459 ntBASIC16.53■□□□□ 0.24
LDB1Q86U70 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.53■□□□□ 0.24
LDB1Q86U70 AC004877.2-201ENST00000623941 599 ntBASIC16.53■□□□□ 0.24
LDB1Q86U70 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.53■□□□□ 0.24
LDB1Q86U70 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.53■□□□□ 0.24
LDB1Q86U70 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LDB1Q86U70 AC025580.3-201ENST00000617932 1424 ntBASIC16.53■□□□□ 0.24
LDB1Q86U70 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.52■□□□□ 0.24
LDB1Q86U70 BCAR1-209ENST00000546196 1340 ntBASIC16.52■□□□□ 0.24
LDB1Q86U70 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.52■□□□□ 0.24
LDB1Q86U70 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.52■□□□□ 0.24
LDB1Q86U70 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
LDB1Q86U70 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.52■□□□□ 0.24
LDB1Q86U70 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.52■□□□□ 0.24
LDB1Q86U70 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.52■□□□□ 0.24
LDB1Q86U70 AL031055.1-201ENST00000606362 631 ntBASIC16.52■□□□□ 0.24
LDB1Q86U70 BX640515.1-201ENST00000617215 977 ntBASIC16.52■□□□□ 0.24
LDB1Q86U70 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LDB1Q86U70 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LDB1Q86U70 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LDB1Q86U70 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LDB1Q86U70 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LDB1Q86U70 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LDB1Q86U70 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LDB1Q86U70 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.52■□□□□ 0.23
LDB1Q86U70 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.51■□□□□ 0.23
LDB1Q86U70 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 AC132872.4-202ENST00000622924 2756 ntBASIC16.51■□□□□ 0.23
LDB1Q86U70 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LDB1Q86U70 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.51■□□□□ 0.23
LDB1Q86U70 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.51■□□□□ 0.23
LDB1Q86U70 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.51■□□□□ 0.23
LDB1Q86U70 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LDB1Q86U70 AC023141.13-201ENST00000604991 943 ntBASIC16.51■□□□□ 0.23
LDB1Q86U70 AL645728.2-201ENST00000641974 660 ntBASIC16.51■□□□□ 0.23
LDB1Q86U70 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms