Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.29■□□□□ 0.2
SYVN1Q86TM6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 MTHFR-217ENST00000641820 1569 ntBASIC16.29■□□□□ 0.2
SYVN1Q86TM6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYVN1Q86TM6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.28■□□□□ 0.2
SYVN1Q86TM6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 YBX1P5-201ENST00000509441 847 ntBASIC16.28■□□□□ 0.2
SYVN1Q86TM6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 C20orf181-201ENST00000623918 480 ntBASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYVN1Q86TM6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.27■□□□□ 0.2
SYVN1Q86TM6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYVN1Q86TM6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms