Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 AC008741.2-201ENST00000612792 3115 ntBASIC16.63■□□□□ 0.25
LYSMD3Q7Z3D4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 AC016027.1-202ENST00000607927 1699 ntBASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 AC005829.1-201ENST00000570002 483 ntBASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 LINC00554-201ENST00000564841 3011 ntBASIC16.62■□□□□ 0.25
LYSMD3Q7Z3D4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AC005052.1-201ENST00000625181 2492 ntBASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AL355306.1-201ENST00000415580 579 ntBASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 MKNK2P1-201ENST00000437526 628 ntBASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AL161645.1-201ENST00000622716 1255 ntBASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD3Q7Z3D4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms