Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COPS6Q7L5N1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 AC022211.2-201ENST00000585075 2527 ntBASIC20.73■□□□□ 0.91
COPS6Q7L5N1 AC090340.1-201ENST00000620778 4980 ntBASIC20.73■□□□□ 0.91
COPS6Q7L5N1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COPS6Q7L5N1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.72■□□□□ 0.91
COPS6Q7L5N1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 LINC01144-201ENST00000626198 1710 ntBASIC20.72■□□□□ 0.91
COPS6Q7L5N1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COPS6Q7L5N1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 SPTLC1P1-201ENST00000447199 261 ntBASIC20.71■□□□□ 0.91
COPS6Q7L5N1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AC009118.2-201ENST00000613275 655 ntBASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPS6Q7L5N1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms