Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC021097.1-201ENST00000607902 574 ntBASIC18.64■□□□□ 0.57
SHC4Q6S5L8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 HLA-A-201ENST00000376802 1334 ntBASIC18.64■□□□□ 0.57
SHC4Q6S5L8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 LINC02447-202ENST00000501888 2146 ntBASIC18.64■□□□□ 0.57
SHC4Q6S5L8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 CRYGEP-201ENST00000412192 528 ntBASIC18.63■□□□□ 0.57
SHC4Q6S5L8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC4Q6S5L8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 PMS2P4-201ENST00000412466 1052 ntBASIC18.62■□□□□ 0.57
SHC4Q6S5L8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 AC096734.2-201ENST00000562054 433 ntBASIC18.62■□□□□ 0.57
SHC4Q6S5L8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 AC069224.1-201ENST00000566372 1715 ntBASIC18.62■□□□□ 0.57
SHC4Q6S5L8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC4Q6S5L8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.61■□□□□ 0.57
SHC4Q6S5L8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SHC4Q6S5L8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms