Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 LAGE3P1-201ENST00000425356 484 ntBASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 AP002469.2-201ENST00000531724 424 ntBASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TP73-AS1-207ENST00000624167 988 ntBASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 AC107918.4-202ENST00000641623 219 ntBASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AL391256.1-201ENST00000443260 1855 ntBASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AC018712.1-201ENST00000455767 687 ntBASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AL353135.1-201ENST00000606729 504 ntBASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATPAF1Q5TC12 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 DBET-201ENST00000630918 3363 ntBASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.41□□□□□ -0.1
ATPAF1Q5TC12 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms