Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 AC133561.5-201ENST00000635547 218 ntBASIC14.87□□□□□ -0.03
CCDC58Q4VC31 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCDC58Q4VC31 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 AL596087.1-201ENST00000400979 1969 ntBASIC14.86□□□□□ -0.03
CCDC58Q4VC31 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 AC063952.2-201ENST00000498792 1227 ntBASIC14.86□□□□□ -0.03
CCDC58Q4VC31 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 TP73-AS1-210ENST00000637775 1455 ntBASIC14.86□□□□□ -0.03
CCDC58Q4VC31 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC58Q4VC31 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 GGT3P-204ENST00000453783 1664 ntBASIC14.85□□□□□ -0.03
CCDC58Q4VC31 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.85□□□□□ -0.03
CCDC58Q4VC31 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC58Q4VC31 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms