Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.45■□□□□ 0.06
RFX4Q33E94 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
RFX4Q33E94 DRAXINP1-201ENST00000437611 948 ntBASIC15.45■□□□□ 0.06
RFX4Q33E94 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.45■□□□□ 0.06
RFX4Q33E94 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.45■□□□□ 0.06
RFX4Q33E94 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.45■□□□□ 0.06
RFX4Q33E94 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.45■□□□□ 0.06
RFX4Q33E94 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RFX4Q33E94 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.45■□□□□ 0.06
RFX4Q33E94 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RFX4Q33E94 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.45■□□□□ 0.06
RFX4Q33E94 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.45■□□□□ 0.06
RFX4Q33E94 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFX4Q33E94 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.45■□□□□ 0.06
RFX4Q33E94 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFX4Q33E94 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.44■□□□□ 0.06
RFX4Q33E94 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.44■□□□□ 0.06
RFX4Q33E94 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RFX4Q33E94 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 RCN1P2-201ENST00000398357 915 ntBASIC15.44■□□□□ 0.06
RFX4Q33E94 AL020989.1-201ENST00000422979 469 ntBASIC15.44■□□□□ 0.06
RFX4Q33E94 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 KRT17P6-201ENST00000453795 1220 ntBASIC15.44■□□□□ 0.06
RFX4Q33E94 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.44■□□□□ 0.06
RFX4Q33E94 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.44■□□□□ 0.06
RFX4Q33E94 BNIP3P18-201ENST00000593976 575 ntBASIC15.44■□□□□ 0.06
RFX4Q33E94 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.44■□□□□ 0.06
RFX4Q33E94 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.44■□□□□ 0.06
RFX4Q33E94 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.44■□□□□ 0.06
RFX4Q33E94 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RFX4Q33E94 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFX4Q33E94 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX4Q33E94 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
RFX4Q33E94 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.43■□□□□ 0.06
RFX4Q33E94 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.43■□□□□ 0.06
RFX4Q33E94 FAM45BP-202ENST00000592932 1624 ntBASIC15.43■□□□□ 0.06
RFX4Q33E94 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.43■□□□□ 0.06
RFX4Q33E94 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RFX4Q33E94 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.43■□□□□ 0.06
RFX4Q33E94 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFX4Q33E94 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFX4Q33E94 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
RFX4Q33E94 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.43■□□□□ 0.06
RFX4Q33E94 POU5F1P6-201ENST00000466990 990 ntBASIC15.43■□□□□ 0.06
RFX4Q33E94 TPSP2-201ENST00000561760 610 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms