Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 HTR7P1-202ENST00000624664 4411 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CTC1Q2NKJ3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTC1Q2NKJ3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AC079776.1-201ENST00000401540 1152 ntBASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AC017083.2-201ENST00000608069 979 ntBASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AL844908.2-201ENST00000609461 460 ntBASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
CTC1Q2NKJ3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 PCDHA14-201ENST00000506751 2298 ntBASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AC091167.2-201ENST00000579581 588 ntBASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTC1Q2NKJ3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 INE1-201ENST00000456273 945 ntBASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 AC104794.3-201ENST00000566840 1248 ntBASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TEX28P1-201ENST00000613479 1221 ntBASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 TEX28P2-201ENST00000617764 1221 ntBASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 AL035456.1-201ENST00000456064 1369 ntBASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms