Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 AC005052.1-201ENST00000625181 2492 ntBASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHROOM1Q2M3G4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 NME2P1-201ENST00000426182 414 ntBASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 AL589987.1-201ENST00000453380 819 ntBASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 WASH4P-201ENST00000564273 1246 ntBASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHROOM1Q2M3G4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 AC020765.3-201ENST00000613051 740 ntBASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 PCGF3-213ENST00000620529 1899 ntBASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHROOM1Q2M3G4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 GGT3P-204ENST00000453783 1664 ntBASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 AP002490.2-201ENST00000524791 560 ntBASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 CHCHD2P3-201ENST00000603038 451 ntBASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms