Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 ALG1L8P-201ENST00000533887 760 ntBASIC19.25■□□□□ 0.67
CCDC96Q2M329 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC96Q2M329 AC084121.4-201ENST00000641598 221 ntBASIC19.25■□□□□ 0.67
CCDC96Q2M329 AF228730.8-201ENST00000642140 221 ntBASIC19.25■□□□□ 0.67
CCDC96Q2M329 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC96Q2M329 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 MIR346-201ENST00000362234 95 ntBASIC19.24■□□□□ 0.67
CCDC96Q2M329 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 AC142381.1-201ENST00000426099 345 ntBASIC19.24■□□□□ 0.67
CCDC96Q2M329 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 MIR6080-201ENST00000617359 66 ntBASIC19.24■□□□□ 0.67
CCDC96Q2M329 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC96Q2M329 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC96Q2M329 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 AC073439.1-201ENST00000624121 1774 ntBASIC19.23■□□□□ 0.67
CCDC96Q2M329 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 RNF216P1-203ENST00000404404 2427 ntBASIC19.23■□□□□ 0.67
CCDC96Q2M329 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC96Q2M329 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC96Q2M329 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC96Q2M329 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC96Q2M329 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms