Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 ATP5G2P1-201ENST00000433580 426 ntBASIC14.95□□□□□ -0.02
CDK5Q00535 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.95□□□□□ -0.02
CDK5Q00535 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 AP001350.2-201ENST00000625104 1094 ntBASIC14.95□□□□□ -0.02
CDK5Q00535 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 AL592424.1-201ENST00000563624 1536 ntBASIC14.95□□□□□ -0.02
CDK5Q00535 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.95□□□□□ -0.02
CDK5Q00535 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDK5Q00535 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CDK5Q00535 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDK5Q00535 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDK5Q00535 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK5Q00535 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK5Q00535 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDK5Q00535 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK5Q00535 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.94□□□□□ -0.02
CDK5Q00535 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.94□□□□□ -0.02
CDK5Q00535 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 AP000550.4-202ENST00000639755 178 ntBASIC14.94□□□□□ -0.02
CDK5Q00535 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDK5Q00535 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDK5Q00535 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK5Q00535 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDK5Q00535 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.93□□□□□ -0.02
CDK5Q00535 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDK5Q00535 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CDK5Q00535 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.93□□□□□ -0.02
CDK5Q00535 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.93□□□□□ -0.02
CDK5Q00535 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 AC005412.3-201ENST00000580309 715 ntBASIC14.93□□□□□ -0.02
CDK5Q00535 MTDHP3-201ENST00000594186 672 ntBASIC14.93□□□□□ -0.02
CDK5Q00535 AC138894.3-201ENST00000603787 634 ntBASIC14.93□□□□□ -0.02
CDK5Q00535 AC069148.1-201ENST00000608741 768 ntBASIC14.93□□□□□ -0.02
CDK5Q00535 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CDK5Q00535 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.93□□□□□ -0.02
CDK5Q00535 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDK5Q00535 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK5Q00535 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK5Q00535 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
CDK5Q00535 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms