Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CBX1P83916 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX1P83916 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX1P83916 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX1P83916 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX1P83916 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX1P83916 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX1P83916 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX1P83916 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CBX1P83916 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CBX1P83916 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 AC009065.1-201ENST00000564055 1225 ntBASIC17.31■□□□□ 0.36
CBX1P83916 MIR3180-5-201ENST00000583743 153 ntBASIC17.31■□□□□ 0.36
CBX1P83916 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX1P83916 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX1P83916 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CBX1P83916 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX1P83916 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBX1P83916 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX1P83916 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX1P83916 AC069224.1-201ENST00000566372 1715 ntBASIC17.3■□□□□ 0.36
CBX1P83916 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX1P83916 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX1P83916 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX1P83916 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CBX1P83916 MIPEPP3-201ENST00000412105 444 ntBASIC17.3■□□□□ 0.36
CBX1P83916 AL355355.2-201ENST00000442321 338 ntBASIC17.3■□□□□ 0.36
CBX1P83916 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.3■□□□□ 0.36
CBX1P83916 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX1P83916 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
CBX1P83916 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CBX1P83916 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 AL928921.2-201ENST00000641325 2442 ntBASIC17.3■□□□□ 0.36
CBX1P83916 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX1P83916 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX1P83916 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBX1P83916 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBX1P83916 AC097637.2-201ENST00000624096 1997 ntBASIC17.29■□□□□ 0.36
CBX1P83916 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX1P83916 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX1P83916 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX1P83916 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms