Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ALG1L5P-201ENST00000482043 771 ntBASIC17.92■□□□□ 0.46
SNRPFP62306 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 AC027307.2-201ENST00000591252 911 ntBASIC17.92■□□□□ 0.46
SNRPFP62306 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNRPFP62306 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.92■□□□□ 0.46
SNRPFP62306 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SNRPFP62306 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNRPFP62306 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.92■□□□□ 0.46
SNRPFP62306 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SNRPFP62306 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.91■□□□□ 0.46
SNRPFP62306 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 AC079140.1-201ENST00000508039 487 ntBASIC17.91■□□□□ 0.46
SNRPFP62306 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.91■□□□□ 0.46
SNRPFP62306 AL138918.1-201ENST00000568306 659 ntBASIC17.91■□□□□ 0.46
SNRPFP62306 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SNRPFP62306 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
SNRPFP62306 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.91■□□□□ 0.46
SNRPFP62306 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNRPFP62306 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SNRPFP62306 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.9■□□□□ 0.46
SNRPFP62306 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.9■□□□□ 0.46
SNRPFP62306 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 AL596087.1-201ENST00000400979 1969 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.9■□□□□ 0.46
SNRPFP62306 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.9■□□□□ 0.46
SNRPFP62306 SPCS2P4-201ENST00000436160 681 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 CEND1P1-201ENST00000451006 455 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 AC112482.1-201ENST00000492080 688 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 KRT8P48-201ENST00000515599 1220 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.9■□□□□ 0.46
SNRPFP62306 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
SNRPFP62306 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.9■□□□□ 0.46
SNRPFP62306 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SNRPFP62306 SPTSSB-204ENST00000617024 1292 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 AC105339.1-204ENST00000636249 355 ntBASIC17.9■□□□□ 0.46
SNRPFP62306 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNRPFP62306 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNRPFP62306 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNRPFP62306 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNRPFP62306 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNRPFP62306 AL513523.2-202ENST00000427283 2040 ntBASIC17.89■□□□□ 0.46
SNRPFP62306 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNRPFP62306 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms