Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.62■□□□□ 0.25
AP1S1P61966 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.62■□□□□ 0.25
AP1S1P61966 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S1P61966 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.61■□□□□ 0.25
AP1S1P61966 KRT18P32-201ENST00000424695 1287 ntBASIC16.61■□□□□ 0.25
AP1S1P61966 AC142381.1-201ENST00000426099 345 ntBASIC16.61■□□□□ 0.25
AP1S1P61966 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.61■□□□□ 0.25
AP1S1P61966 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.61■□□□□ 0.25
AP1S1P61966 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.61■□□□□ 0.25
AP1S1P61966 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
AP1S1P61966 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
AP1S1P61966 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 AC009093.7-201ENST00000623853 1223 ntBASIC16.61■□□□□ 0.25
AP1S1P61966 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S1P61966 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S1P61966 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.6■□□□□ 0.25
AP1S1P61966 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
AP1S1P61966 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.6■□□□□ 0.25
AP1S1P61966 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 AC027612.4-201ENST00000605371 583 ntBASIC16.6■□□□□ 0.25
AP1S1P61966 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.6■□□□□ 0.25
AP1S1P61966 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.6■□□□□ 0.25
AP1S1P61966 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.6■□□□□ 0.25
AP1S1P61966 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.6■□□□□ 0.25
AP1S1P61966 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.6■□□□□ 0.25
AP1S1P61966 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP1S1P61966 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
AP1S1P61966 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S1P61966 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP1S1P61966 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP1S1P61966 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
AP1S1P61966 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.59■□□□□ 0.25
AP1S1P61966 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 AC005622.1-201ENST00000636801 1703 ntBASIC16.59■□□□□ 0.25
AP1S1P61966 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
AP1S1P61966 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S1P61966 U82695.1-201ENST00000635752 1889 ntBASIC16.59■□□□□ 0.25
AP1S1P61966 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AP1S1P61966 ALOX12P2-203ENST00000570921 1945 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms