Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.89□□□□□ -0.03
VBP1P61758 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
VBP1P61758 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.88□□□□□ -0.03
VBP1P61758 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.88□□□□□ -0.03
VBP1P61758 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VBP1P61758 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.88□□□□□ -0.03
VBP1P61758 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VBP1P61758 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.87□□□□□ -0.03
VBP1P61758 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.87□□□□□ -0.03
VBP1P61758 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VBP1P61758 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 NEK4P2-201ENST00000580004 1012 ntBASIC14.87□□□□□ -0.03
VBP1P61758 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.87□□□□□ -0.03
VBP1P61758 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.87□□□□□ -0.03
VBP1P61758 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 AC006277.1-201ENST00000624348 1610 ntBASIC14.87□□□□□ -0.03
VBP1P61758 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VBP1P61758 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.87□□□□□ -0.03
VBP1P61758 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VBP1P61758 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VBP1P61758 AC020658.6-201ENST00000623564 1870 ntBASIC14.86□□□□□ -0.03
VBP1P61758 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.86□□□□□ -0.03
VBP1P61758 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.86□□□□□ -0.03
VBP1P61758 AC009336.1-201ENST00000608941 1553 ntBASIC14.86□□□□□ -0.03
VBP1P61758 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VBP1P61758 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VBP1P61758 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms