Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CXCR4P61073 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.11■□□□□ 0.01
CXCR4P61073 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CXCR4P61073 NUS1P1-201ENST00000446295 882 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 BX276092.5-203ENST00000456199 560 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.11■□□□□ 0.01
CXCR4P61073 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.11■□□□□ 0.01
CXCR4P61073 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.11■□□□□ 0.01
CXCR4P61073 AP005901.3-202ENST00000581653 237 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 NTF6B-201ENST00000591913 560 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 TP73-AS1-210ENST00000637775 1455 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.11■□□□□ 0.01
CXCR4P61073 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 PRAL-201ENST00000624952 3286 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCR4P61073 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 AL109954.1-202ENST00000564051 2148 ntBASIC15.1■□□□□ 0.01
CXCR4P61073 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCR4P61073 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.1■□□□□ 0.01
CXCR4P61073 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.1■□□□□ 0.01
CXCR4P61073 CHCHD2P8-201ENST00000429873 447 ntBASIC15.1■□□□□ 0.01
CXCR4P61073 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 AL121672.3-201ENST00000608644 468 ntBASIC15.1■□□□□ 0.01
CXCR4P61073 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCR4P61073 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCR4P61073 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXCR4P61073 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.1■□□□□ 0.01
CXCR4P61073 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.1■□□□□ 0.01
CXCR4P61073 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCR4P61073 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCR4P61073 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.09■□□□□ 0.01
CXCR4P61073 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.09■□□□□ 0.01
CXCR4P61073 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCR4P61073 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CXCR4P61073 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.09■□□□□ 0.01
CXCR4P61073 RN7SL850P-201ENST00000579959 291 ntBASIC15.09■□□□□ 0.01
CXCR4P61073 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CXCR4P61073 PGM5P2-202ENST00000637225 1043 ntBASIC15.09■□□□□ 0.01
CXCR4P61073 PCGF3-213ENST00000620529 1899 ntBASIC15.09■□□□□ 0.01
CXCR4P61073 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.09■□□□□ 0.01
CXCR4P61073 AC148477.5-201ENST00000625164 1645 ntBASIC15.09■□□□□ 0.01
CXCR4P61073 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.09■□□□□ 0.01
CXCR4P61073 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CXCR4P61073 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms