Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP54P61011 AC008677.1-201ENST00000519230 1561 ntBASIC16.32■□□□□ 0.2
SRP54P61011 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP54P61011 AC105233.2-201ENST00000523697 349 ntBASIC16.32■□□□□ 0.2
SRP54P61011 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP54P61011 AF228730.5-201ENST00000530288 346 ntBASIC16.32■□□□□ 0.2
SRP54P61011 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP54P61011 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP54P61011 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.32■□□□□ 0.2
SRP54P61011 AC051619.7-201ENST00000568314 623 ntBASIC16.32■□□□□ 0.2
SRP54P61011 AC005498.2-205ENST00000593218 784 ntBASIC16.32■□□□□ 0.2
SRP54P61011 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP54P61011 PCDHA12-202ENST00000613593 2588 ntBASIC16.32■□□□□ 0.2
SRP54P61011 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.32■□□□□ 0.2
SRP54P61011 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.32■□□□□ 0.2
SRP54P61011 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SRP54P61011 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP54P61011 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP54P61011 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP54P61011 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP54P61011 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP54P61011 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
SRP54P61011 SNX33P1-201ENST00000592116 1762 ntBASIC16.31■□□□□ 0.2
SRP54P61011 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SRP54P61011 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP54P61011 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.31■□□□□ 0.2
SRP54P61011 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.31■□□□□ 0.2
SRP54P61011 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.31■□□□□ 0.2
SRP54P61011 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SRP54P61011 AC092364.2-202ENST00000597012 1073 ntBASIC16.31■□□□□ 0.2
SRP54P61011 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SRP54P61011 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 AC060834.1-201ENST00000443027 2032 ntBASIC16.31■□□□□ 0.2
SRP54P61011 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.31■□□□□ 0.2
SRP54P61011 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP54P61011 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRP54P61011 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP54P61011 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.3■□□□□ 0.2
SRP54P61011 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
SRP54P61011 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRP54P61011 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRP54P61011 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.3■□□□□ 0.2
SRP54P61011 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 FAM8A3P-201ENST00000427218 844 ntBASIC16.3■□□□□ 0.2
SRP54P61011 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.3■□□□□ 0.2
SRP54P61011 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.3■□□□□ 0.2
SRP54P61011 AC125807.1-201ENST00000483097 614 ntBASIC16.3■□□□□ 0.2
SRP54P61011 PRYP6-201ENST00000514804 343 ntBASIC16.3■□□□□ 0.2
SRP54P61011 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.3■□□□□ 0.2
SRP54P61011 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 SPCS2P1-201ENST00000561636 679 ntBASIC16.3■□□□□ 0.2
SRP54P61011 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SRP54P61011 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.3■□□□□ 0.2
SRP54P61011 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.3■□□□□ 0.2
SRP54P61011 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.3■□□□□ 0.2
SRP54P61011 AC073389.1-201ENST00000595595 795 ntBASIC16.3■□□□□ 0.2
SRP54P61011 MIR6080-201ENST00000617359 66 ntBASIC16.3■□□□□ 0.2
SRP54P61011 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.3■□□□□ 0.2
SRP54P61011 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.3■□□□□ 0.2
SRP54P61011 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.3■□□□□ 0.2
SRP54P61011 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRP54P61011 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms