Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MCCD1P59942 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MCCD1P59942 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MCCD1P59942 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
MCCD1P59942 AC011477.6-201ENST00000604980 1927 ntBASIC17.6■□□□□ 0.41
MCCD1P59942 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.6■□□□□ 0.41
MCCD1P59942 LINC02447-202ENST00000501888 2146 ntBASIC17.6■□□□□ 0.41
MCCD1P59942 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MCCD1P59942 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MCCD1P59942 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MCCD1P59942 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.59■□□□□ 0.41
MCCD1P59942 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.59■□□□□ 0.41
MCCD1P59942 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 AL592309.1-201ENST00000443127 649 ntBASIC17.59■□□□□ 0.41
MCCD1P59942 AP006288.1-201ENST00000446065 395 ntBASIC17.59■□□□□ 0.41
MCCD1P59942 CEND1P1-201ENST00000451006 455 ntBASIC17.59■□□□□ 0.41
MCCD1P59942 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.59■□□□□ 0.41
MCCD1P59942 AP000344.2-201ENST00000512987 629 ntBASIC17.59■□□□□ 0.41
MCCD1P59942 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 PCDHA1-201ENST00000378133 2726 ntBASIC17.59■□□□□ 0.41
MCCD1P59942 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.59■□□□□ 0.41
MCCD1P59942 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MCCD1P59942 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MCCD1P59942 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MCCD1P59942 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MCCD1P59942 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
MCCD1P59942 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MCCD1P59942 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MCCD1P59942 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.58■□□□□ 0.4
MCCD1P59942 HAUS4P1-201ENST00000406739 1145 ntBASIC17.58■□□□□ 0.4
MCCD1P59942 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.58■□□□□ 0.4
MCCD1P59942 FAM58DP-201ENST00000428076 619 ntBASIC17.58■□□□□ 0.4
MCCD1P59942 EEF1DP4-201ENST00000446006 880 ntBASIC17.58■□□□□ 0.4
MCCD1P59942 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.58■□□□□ 0.4
MCCD1P59942 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.58■□□□□ 0.4
MCCD1P59942 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
MCCD1P59942 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.58■□□□□ 0.4
MCCD1P59942 AC055717.3-201ENST00000622967 595 ntBASIC17.58■□□□□ 0.4
MCCD1P59942 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MCCD1P59942 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MCCD1P59942 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MCCD1P59942 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.58■□□□□ 0.4
MCCD1P59942 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MCCD1P59942 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MCCD1P59942 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.58■□□□□ 0.4
MCCD1P59942 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 AP3S2-216ENST00000617003 1561 ntBASIC17.57■□□□□ 0.4
MCCD1P59942 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 AP001282.1-201ENST00000531301 1499 ntBASIC17.57■□□□□ 0.4
MCCD1P59942 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
MCCD1P59942 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 AL691432.1-201ENST00000596308 1422 ntBASIC17.57■□□□□ 0.4
MCCD1P59942 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.57■□□□□ 0.4
MCCD1P59942 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.57■□□□□ 0.4
MCCD1P59942 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.57■□□□□ 0.4
MCCD1P59942 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
MCCD1P59942 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.57■□□□□ 0.4
MCCD1P59942 SLC25A39P2-201ENST00000537614 270 ntBASIC17.57■□□□□ 0.4
MCCD1P59942 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MCCD1P59942 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MCCD1P59942 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MCCD1P59942 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms