Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.21■□□□□ 0.03
CLDN20P56880 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CLDN20P56880 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 AL021920.2-201ENST00000624828 1351 ntBASIC15.21■□□□□ 0.02
CLDN20P56880 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN20P56880 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN20P56880 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN20P56880 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
CLDN20P56880 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
CLDN20P56880 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CLDN20P56880 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN20P56880 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 KRT8P49-201ENST00000604166 1432 ntBASIC15.2■□□□□ 0.02
CLDN20P56880 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN20P56880 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN20P56880 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN20P56880 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN20P56880 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN20P56880 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 AC010327.4-202ENST00000591484 748 ntBASIC15.2■□□□□ 0.02
CLDN20P56880 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN20P56880 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN20P56880 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN20P56880 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 AC104640.1-201ENST00000562617 2109 ntBASIC15.2■□□□□ 0.02
CLDN20P56880 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN20P56880 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN20P56880 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN20P56880 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN20P56880 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN20P56880 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.19■□□□□ 0.02
CLDN20P56880 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms