Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.47□□□□□ -0.09
FOXG1P55316 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.47□□□□□ -0.09
FOXG1P55316 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
FOXG1P55316 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.47□□□□□ -0.09
FOXG1P55316 KRT8P23-201ENST00000560090 1207 ntBASIC14.47□□□□□ -0.09
FOXG1P55316 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.47□□□□□ -0.09
FOXG1P55316 AC073389.1-201ENST00000595595 795 ntBASIC14.47□□□□□ -0.09
FOXG1P55316 AC020765.3-201ENST00000613051 740 ntBASIC14.47□□□□□ -0.09
FOXG1P55316 AC093028.1-201ENST00000622998 982 ntBASIC14.47□□□□□ -0.09
FOXG1P55316 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
FOXG1P55316 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
FOXG1P55316 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FOXG1P55316 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.46□□□□□ -0.09
FOXG1P55316 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXG1P55316 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
FOXG1P55316 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.46□□□□□ -0.09
FOXG1P55316 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXG1P55316 RBPMS2P1-201ENST00000437762 623 ntBASIC14.46□□□□□ -0.09
FOXG1P55316 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXG1P55316 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXG1P55316 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXG1P55316 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXG1P55316 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXG1P55316 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXG1P55316 LINC00628-201ENST00000628516 1289 ntBASIC14.46□□□□□ -0.09
FOXG1P55316 AC084121.4-201ENST00000641598 221 ntBASIC14.46□□□□□ -0.09
FOXG1P55316 AF228730.8-201ENST00000642140 221 ntBASIC14.46□□□□□ -0.09
FOXG1P55316 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXG1P55316 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
FOXG1P55316 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.46□□□□□ -0.09
FOXG1P55316 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXG1P55316 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
FOXG1P55316 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms