Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CDH13P55290 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH13P55290 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH13P55290 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CDH13P55290 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 UNC93B7-201ENST00000509439 705 ntBASIC16.23■□□□□ 0.19
CDH13P55290 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 OR7E14P-202ENST00000530490 1290 ntBASIC16.23■□□□□ 0.19
CDH13P55290 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH13P55290 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDH13P55290 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDH13P55290 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH13P55290 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDH13P55290 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH13P55290 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH13P55290 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH13P55290 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 REXO1L8P-201ENST00000604378 1897 ntBASIC16.22■□□□□ 0.19
CDH13P55290 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH13P55290 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH13P55290 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CDH13P55290 DUSP5P1-201ENST00000441325 1139 ntBASIC16.22■□□□□ 0.19
CDH13P55290 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH13P55290 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH13P55290 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH13P55290 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH13P55290 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDH13P55290 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDH13P55290 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 AC105917.1-201ENST00000506637 2539 ntBASIC16.22■□□□□ 0.19
CDH13P55290 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH13P55290 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH13P55290 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH13P55290 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH13P55290 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH13P55290 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH13P55290 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.21■□□□□ 0.19
CDH13P55290 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH13P55290 RNPS1P1-201ENST00000507437 918 ntBASIC16.21■□□□□ 0.19
CDH13P55290 AC136632.2-201ENST00000512891 861 ntBASIC16.21■□□□□ 0.19
CDH13P55290 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 AC087641.1-201ENST00000557561 1021 ntBASIC16.21■□□□□ 0.19
CDH13P55290 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH13P55290 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH13P55290 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 GGTLC5P-201ENST00000617623 998 ntBASIC16.21■□□□□ 0.19
CDH13P55290 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CDH13P55290 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH13P55290 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH13P55290 AL603832.2-201ENST00000566195 2125 ntBASIC16.21■□□□□ 0.18
CDH13P55290 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CDH13P55290 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH13P55290 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH13P55290 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.2■□□□□ 0.18
CDH13P55290 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms