Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH12P55289 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH12P55289 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH12P55289 FGFR3P6-201ENST00000457012 610 ntBASIC15.47■□□□□ 0.07
CDH12P55289 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH12P55289 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CDH12P55289 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH12P55289 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH12P55289 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH12P55289 SART3-203ENST00000546611 1184 ntBASIC15.47■□□□□ 0.07
CDH12P55289 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH12P55289 AC010491.1-201ENST00000563101 2797 ntBASIC15.47■□□□□ 0.07
CDH12P55289 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH12P55289 AC008608.2-201ENST00000606089 416 ntBASIC15.47■□□□□ 0.07
CDH12P55289 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
CDH12P55289 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH12P55289 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH12P55289 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH12P55289 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH12P55289 AC103702.1-201ENST00000548801 2630 ntBASIC15.47■□□□□ 0.07
CDH12P55289 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.46■□□□□ 0.07
CDH12P55289 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH12P55289 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH12P55289 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 GGT4P-201ENST00000623672 1708 ntBASIC15.46■□□□□ 0.07
CDH12P55289 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
CDH12P55289 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDH12P55289 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 AL603832.2-201ENST00000566195 2125 ntBASIC15.46■□□□□ 0.07
CDH12P55289 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH12P55289 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH12P55289 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH12P55289 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH12P55289 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDH12P55289 PRELID1P1-202ENST00000567272 903 ntBASIC15.46■□□□□ 0.07
CDH12P55289 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH12P55289 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH12P55289 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.46■□□□□ 0.07
CDH12P55289 MTDHP4-201ENST00000600287 670 ntBASIC15.46■□□□□ 0.07
CDH12P55289 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH12P55289 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.46■□□□□ 0.07
CDH12P55289 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH12P55289 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH12P55289 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CDH12P55289 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CDH12P55289 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDH12P55289 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH12P55289 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH12P55289 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH12P55289 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH12P55289 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CDH12P55289 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDH12P55289 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH12P55289 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 AC006449.6-201ENST00000612330 2296 ntBASIC15.45■□□□□ 0.06
CDH12P55289 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH12P55289 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CDH12P55289 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH12P55289 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms