Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LBX1P52954 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LBX1P52954 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LBX1P52954 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.33■□□□□ 0.53
LBX1P52954 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBX1P52954 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LBX1P52954 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.33■□□□□ 0.53
LBX1P52954 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LBX1P52954 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBX1P52954 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.33■□□□□ 0.53
LBX1P52954 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBX1P52954 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LBX1P52954 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LBX1P52954 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LBX1P52954 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LBX1P52954 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 AC007274.2-201ENST00000421675 662 ntBASIC18.33■□□□□ 0.52
LBX1P52954 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 NUP210P1-202ENST00000504322 710 ntBASIC18.33■□□□□ 0.52
LBX1P52954 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.33■□□□□ 0.52
LBX1P52954 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.33■□□□□ 0.52
LBX1P52954 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.33■□□□□ 0.52
LBX1P52954 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.33■□□□□ 0.52
LBX1P52954 RN7SL774P-201ENST00000577467 290 ntBASIC18.33■□□□□ 0.52
LBX1P52954 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.33■□□□□ 0.52
LBX1P52954 COX6A1P2-201ENST00000620597 330 ntBASIC18.33■□□□□ 0.52
LBX1P52954 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.33■□□□□ 0.52
LBX1P52954 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBX1P52954 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBX1P52954 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LBX1P52954 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LBX1P52954 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.32■□□□□ 0.52
LBX1P52954 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LBX1P52954 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LBX1P52954 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 AC120498.9-201ENST00000339021 3867 ntBASIC18.32■□□□□ 0.52
LBX1P52954 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.32■□□□□ 0.52
LBX1P52954 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LBX1P52954 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.32■□□□□ 0.52
LBX1P52954 RPL13P2-201ENST00000440687 659 ntBASIC18.32■□□□□ 0.52
LBX1P52954 AC098935.1-201ENST00000446057 611 ntBASIC18.32■□□□□ 0.52
LBX1P52954 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.32■□□□□ 0.52
LBX1P52954 AC022137.2-201ENST00000503482 481 ntBASIC18.32■□□□□ 0.52
LBX1P52954 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 NPM1P43-201ENST00000558669 786 ntBASIC18.32■□□□□ 0.52
LBX1P52954 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LBX1P52954 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.32■□□□□ 0.52
LBX1P52954 AC091544.8-201ENST00000619490 361 ntBASIC18.32■□□□□ 0.52
LBX1P52954 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.32■□□□□ 0.52
LBX1P52954 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LBX1P52954 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.32■□□□□ 0.52
LBX1P52954 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.31■□□□□ 0.52
LBX1P52954 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.31■□□□□ 0.52
LBX1P52954 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.31■□□□□ 0.52
LBX1P52954 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LBX1P52954 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LBX1P52954 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.31■□□□□ 0.52
LBX1P52954 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.31■□□□□ 0.52
LBX1P52954 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.31■□□□□ 0.52
LBX1P52954 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.31■□□□□ 0.52
LBX1P52954 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.31■□□□□ 0.52
LBX1P52954 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.31■□□□□ 0.52
LBX1P52954 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.31■□□□□ 0.52
LBX1P52954 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LBX1P52954 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.31■□□□□ 0.52
LBX1P52954 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LBX1P52954 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.31■□□□□ 0.52
LBX1P52954 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms