Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF144AP50876 AC132872.4-202ENST00000622924 2756 ntBASIC15.44■□□□□ 0.06
RNF144AP50876 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF144AP50876 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 IGLL3P-201ENST00000412472 434 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 AC026396.1-201ENST00000419388 421 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 FDX1P1-201ENST00000449115 551 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 AP002490.2-201ENST00000524791 560 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 AC018845.2-201ENST00000568326 409 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 ACTL9-202ENST00000612068 1252 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 MST1L-201ENST00000442552 2185 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 AL513477.1-201ENST00000602865 2407 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF144AP50876 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF144AP50876 AL512652.2-201ENST00000625156 1716 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 IL9RP2-201ENST00000423948 1312 ntBASIC15.43■□□□□ 0.06
RNF144AP50876 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RNF144AP50876 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF144AP50876 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF144AP50876 AC006538.1-201ENST00000567905 1585 ntBASIC15.42■□□□□ 0.06
RNF144AP50876 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF144AP50876 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 AL590627.1-203ENST00000421194 1026 ntBASIC15.42■□□□□ 0.06
RNF144AP50876 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF144AP50876 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF144AP50876 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF144AP50876 MIR4492-201ENST00000581627 80 ntBASIC15.42■□□□□ 0.06
RNF144AP50876 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
RNF144AP50876 AC120114.3-201ENST00000611923 658 ntBASIC15.42■□□□□ 0.06
RNF144AP50876 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF144AP50876 PGM5P2-202ENST00000637225 1043 ntBASIC15.42■□□□□ 0.06
RNF144AP50876 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF144AP50876 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF144AP50876 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms