Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.63□□□□□ -0.07
SOX2P48431 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.63□□□□□ -0.07
SOX2P48431 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.63□□□□□ -0.07
SOX2P48431 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.63□□□□□ -0.07
SOX2P48431 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.63□□□□□ -0.07
SOX2P48431 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 IGHV3-47-201ENST00000425060 335 ntBASIC14.63□□□□□ -0.07
SOX2P48431 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SOX2P48431 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
SOX2P48431 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.63□□□□□ -0.07
SOX2P48431 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SOX2P48431 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 AL603832.2-201ENST00000566195 2125 ntBASIC14.63□□□□□ -0.07
SOX2P48431 AC144831.1-201ENST00000573312 2656 ntBASIC14.63□□□□□ -0.07
SOX2P48431 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 GGT4P-201ENST00000623672 1708 ntBASIC14.63□□□□□ -0.07
SOX2P48431 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.63□□□□□ -0.07
SOX2P48431 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SOX2P48431 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 PRAL-201ENST00000624952 3286 ntBASIC14.63□□□□□ -0.07
SOX2P48431 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.63□□□□□ -0.07
SOX2P48431 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 AC006449.6-201ENST00000612330 2296 ntBASIC14.62□□□□□ -0.07
SOX2P48431 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 ABCD1P5-201ENST00000445663 754 ntBASIC14.62□□□□□ -0.07
SOX2P48431 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.62□□□□□ -0.07
SOX2P48431 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.62□□□□□ -0.07
SOX2P48431 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.62□□□□□ -0.07
SOX2P48431 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 AC079776.2-201ENST00000641154 1609 ntBASIC14.62□□□□□ -0.07
SOX2P48431 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.62□□□□□ -0.07
SOX2P48431 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.62□□□□□ -0.07
SOX2P48431 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SOX2P48431 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SOX2P48431 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms