Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.12■□□□□ 0.17
RABIFP47224 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.12■□□□□ 0.17
RABIFP47224 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.12■□□□□ 0.17
RABIFP47224 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.12■□□□□ 0.17
RABIFP47224 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 AP001094.4-201ENST00000579008 2176 ntBASIC16.12■□□□□ 0.17
RABIFP47224 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.12■□□□□ 0.17
RABIFP47224 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.12■□□□□ 0.17
RABIFP47224 AC015922.1-201ENST00000421102 1152 ntBASIC16.12■□□□□ 0.17
RABIFP47224 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 AC009477.1-201ENST00000452936 217 ntBASIC16.12■□□□□ 0.17
RABIFP47224 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.12■□□□□ 0.17
RABIFP47224 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.12■□□□□ 0.17
RABIFP47224 SERBP1P5-201ENST00000510079 1181 ntBASIC16.12■□□□□ 0.17
RABIFP47224 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.12■□□□□ 0.17
RABIFP47224 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.12■□□□□ 0.17
RABIFP47224 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.12■□□□□ 0.17
RABIFP47224 AC061975.2-201ENST00000581722 295 ntBASIC16.12■□□□□ 0.17
RABIFP47224 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 AF228730.6-201ENST00000641497 218 ntBASIC16.12■□□□□ 0.17
RABIFP47224 AC084121.3-201ENST00000641716 218 ntBASIC16.12■□□□□ 0.17
RABIFP47224 AC105233.6-201ENST00000642093 218 ntBASIC16.12■□□□□ 0.17
RABIFP47224 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RABIFP47224 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RABIFP47224 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.12■□□□□ 0.17
RABIFP47224 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RABIFP47224 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
RABIFP47224 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RABIFP47224 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.11■□□□□ 0.17
RABIFP47224 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RABIFP47224 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.11■□□□□ 0.17
RABIFP47224 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.11■□□□□ 0.17
RABIFP47224 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.11■□□□□ 0.17
RABIFP47224 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 AC239800.4-201ENST00000603712 296 ntBASIC16.11■□□□□ 0.17
RABIFP47224 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.11■□□□□ 0.17
RABIFP47224 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RABIFP47224 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.11■□□□□ 0.17
RABIFP47224 LINC01144-201ENST00000626198 1710 ntBASIC16.11■□□□□ 0.17
RABIFP47224 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RABIFP47224 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.1■□□□□ 0.17
RABIFP47224 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RABIFP47224 FZD10-202ENST00000539839 3282 ntBASIC16.1■□□□□ 0.17
RABIFP47224 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RABIFP47224 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RABIFP47224 PIN1P1-201ENST00000412108 996 ntBASIC16.1■□□□□ 0.17
RABIFP47224 AL080243.2-201ENST00000418783 582 ntBASIC16.1■□□□□ 0.17
RABIFP47224 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.1■□□□□ 0.17
RABIFP47224 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.1■□□□□ 0.17
RABIFP47224 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms