Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 AC024909.3-201ENST00000611513 2257 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 PTCHD3P3-201ENST00000403073 906 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 AC008667.4-201ENST00000607370 168 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 AC023511.2-201ENST00000618803 211 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 AL805961.1-202ENST00000641562 540 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHRNA3P32297 FER1L4-210ENST00000615531 5998 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 PAUPAR-201ENST00000630360 2965 ntBASIC17.48■□□□□ 0.39
CHRNA3P32297 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA3P32297 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA3P32297 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA3P32297 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA3P32297 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 KRT18P3-201ENST00000451602 1288 ntBASIC17.47■□□□□ 0.39
CHRNA3P32297 IGHV3-65-201ENST00000523210 341 ntBASIC17.47■□□□□ 0.39
CHRNA3P32297 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.47■□□□□ 0.39
CHRNA3P32297 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA3P32297 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHRNA3P32297 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA3P32297 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA3P32297 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA3P32297 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA3P32297 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA3P32297 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA3P32297 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRNA3P32297 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA3P32297 AC002310.6-201ENST00000624451 1377 ntBASIC17.46■□□□□ 0.39
CHRNA3P32297 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHRNA3P32297 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA3P32297 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA3P32297 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CHRNA3P32297 AC007967.2-201ENST00000432613 625 ntBASIC17.46■□□□□ 0.39
CHRNA3P32297 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CHRNA3P32297 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.46■□□□□ 0.39
CHRNA3P32297 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA3P32297 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA3P32297 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA3P32297 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms