Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CNN2P2-201ENST00000443536 909 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 CNN2P3-201ENST00000450201 906 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 AC098859.1-201ENST00000502915 1238 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC6A4P31645 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
SLC6A4P31645 AC051619.7-201ENST00000568314 623 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 AL136317.3-201ENST00000618497 906 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC6A4P31645 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SLC6A4P31645 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 TUBB3P1-201ENST00000405796 1332 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A4P31645 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC6A4P31645 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A4P31645 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 DUX4L27-201ENST00000554796 1261 ntBASIC16.91■□□□□ 0.3
SLC6A4P31645 MIR4453-201ENST00000584019 89 ntBASIC16.91■□□□□ 0.3
SLC6A4P31645 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A4P31645 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC6A4P31645 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 PKD1P1-201ENST00000458669 6805 ntBASIC16.91■□□□□ 0.3
SLC6A4P31645 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A4P31645 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.91■□□□□ 0.3
SLC6A4P31645 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A4P31645 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A4P31645 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SLC6A4P31645 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A4P31645 LINC01144-201ENST00000626198 1710 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A4P31645 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A4P31645 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A4P31645 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 FAM220BP-201ENST00000377689 816 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 HLA-H-201ENST00000383620 1096 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 SPDYE7P-202ENST00000420373 878 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC6A4P31645 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC6A4P31645 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC6A4P31645 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC6A4P31645 AC018529.1-201ENST00000613063 361 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A4P31645 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A4P31645 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A4P31645 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SLC6A4P31645 AL589702.1-201ENST00000641229 1509 ntBASIC16.9■□□□□ 0.3
SLC6A4P31645 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms