Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH3P22223 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDH3P22223 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH3P22223 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH3P22223 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CDH3P22223 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDH3P22223 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH3P22223 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH3P22223 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH3P22223 CEND1P1-201ENST00000451006 455 ntBASIC16.27■□□□□ 0.2
CDH3P22223 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CDH3P22223 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH3P22223 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDH3P22223 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH3P22223 AL031432.2-201ENST00000566714 459 ntBASIC16.27■□□□□ 0.2
CDH3P22223 AL928711.1-201ENST00000570165 459 ntBASIC16.27■□□□□ 0.2
CDH3P22223 MIR4469-201ENST00000583919 79 ntBASIC16.27■□□□□ 0.2
CDH3P22223 MIR4515-201ENST00000584082 81 ntBASIC16.27■□□□□ 0.2
CDH3P22223 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH3P22223 AC134684.3-201ENST00000641758 218 ntBASIC16.27■□□□□ 0.2
CDH3P22223 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH3P22223 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH3P22223 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH3P22223 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CDH3P22223 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH3P22223 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH3P22223 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.27■□□□□ 0.19
CDH3P22223 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH3P22223 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.27■□□□□ 0.19
CDH3P22223 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.27■□□□□ 0.19
CDH3P22223 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CDH3P22223 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH3P22223 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 TOP3BP1-201ENST00000420768 1380 ntBASIC16.26■□□□□ 0.19
CDH3P22223 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.26■□□□□ 0.19
CDH3P22223 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH3P22223 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
CDH3P22223 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH3P22223 AC091812.2-201ENST00000619081 385 ntBASIC16.26■□□□□ 0.19
CDH3P22223 AL353732.1-201ENST00000569618 1459 ntBASIC16.26■□□□□ 0.19
CDH3P22223 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH3P22223 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH3P22223 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDH3P22223 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH3P22223 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 AC012569.1-201ENST00000591191 1524 ntBASIC16.25■□□□□ 0.19
CDH3P22223 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms