Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NF1P21359 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NF1P21359 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NF1P21359 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.22□□□□□ -0.29
NF1P21359 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NF1P21359 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NF1P21359 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NF1P21359 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.22□□□□□ -0.29
NF1P21359 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 AZGP1P1-201ENST00000411909 902 ntBASIC13.21□□□□□ -0.29
NF1P21359 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.21□□□□□ -0.29
NF1P21359 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.21□□□□□ -0.29
NF1P21359 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 CLK3P2-201ENST00000427566 1453 ntBASIC13.21□□□□□ -0.29
NF1P21359 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NF1P21359 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.21□□□□□ -0.29
NF1P21359 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.21□□□□□ -0.29
NF1P21359 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.21□□□□□ -0.29
NF1P21359 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.21□□□□□ -0.29
NF1P21359 ENPP7P5-201ENST00000541031 1031 ntBASIC13.21□□□□□ -0.29
NF1P21359 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NF1P21359 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.21□□□□□ -0.29
NF1P21359 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NF1P21359 LINC00895-201ENST00000629028 1637 ntBASIC13.21□□□□□ -0.29
NF1P21359 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NF1P21359 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NF1P21359 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NF1P21359 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NF1P21359 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NF1P21359 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.21□□□□□ -0.3
NF1P21359 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.21□□□□□ -0.3
NF1P21359 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NF1P21359 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.21□□□□□ -0.3
NF1P21359 SPDYE17-201ENST00000412399 783 ntBASIC13.21□□□□□ -0.3
NF1P21359 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.21□□□□□ -0.3
NF1P21359 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.21□□□□□ -0.3
NF1P21359 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.21□□□□□ -0.3
NF1P21359 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.21□□□□□ -0.3
NF1P21359 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.21□□□□□ -0.3
NF1P21359 AL096828.3-201ENST00000615354 462 ntBASIC13.21□□□□□ -0.3
NF1P21359 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
NF1P21359 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.21□□□□□ -0.3
NF1P21359 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.2□□□□□ -0.3
NF1P21359 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 AC018735.1-201ENST00000437208 1502 ntBASIC13.2□□□□□ -0.3
NF1P21359 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NF1P21359 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.2□□□□□ -0.3
NF1P21359 AC016700.1-201ENST00000429424 312 ntBASIC13.2□□□□□ -0.3
NF1P21359 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.2□□□□□ -0.3
NF1P21359 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.2□□□□□ -0.3
NF1P21359 AC244669.2-201ENST00000612320 853 ntBASIC13.2□□□□□ -0.3
NF1P21359 COX6A1P2-201ENST00000620597 330 ntBASIC13.2□□□□□ -0.3
NF1P21359 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.2□□□□□ -0.3
NF1P21359 AC012313.1-201ENST00000593393 3059 ntBASIC13.2□□□□□ -0.3
NF1P21359 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 BICD1-207ENST00000551848 1962 ntBASIC13.2□□□□□ -0.3
NF1P21359 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.2□□□□□ -0.3
NF1P21359 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.2□□□□□ -0.3
NF1P21359 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.2□□□□□ -0.3
NF1P21359 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NF1P21359 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.2□□□□□ -0.3
NF1P21359 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
NF1P21359 CU634019.7-201ENST00000624153 1185 ntBASIC13.2□□□□□ -0.3
NF1P21359 FP236241.2-201ENST00000624906 1185 ntBASIC13.2□□□□□ -0.3
NF1P21359 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.2□□□□□ -0.3
NF1P21359 AC244452.3-201ENST00000636814 210 ntBASIC13.2□□□□□ -0.3
NF1P21359 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.2□□□□□ -0.3
NF1P21359 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NF1P21359 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NF1P21359 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NF1P21359 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.19□□□□□ -0.3
NF1P21359 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NF1P21359 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NF1P21359 AC006480.2-201ENST00000609770 1337 ntBASIC13.19□□□□□ -0.3
NF1P21359 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NF1P21359 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
NF1P21359 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NF1P21359 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms