Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB3BP20337 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 AL031731.1-201ENST00000642131 2094 ntBASIC14.56□□□□□ -0.08
RAB3BP20337 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB3BP20337 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 AL512652.2-201ENST00000625156 1716 ntBASIC14.56□□□□□ -0.08
RAB3BP20337 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3BP20337 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RAB3BP20337 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3BP20337 POU5F1P6-201ENST00000466990 990 ntBASIC14.56□□□□□ -0.08
RAB3BP20337 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB3BP20337 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB3BP20337 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
RAB3BP20337 AC090616.6-201ENST00000582640 721 ntBASIC14.56□□□□□ -0.08
RAB3BP20337 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
RAB3BP20337 IGHV3-41-201ENST00000613121 348 ntBASIC14.56□□□□□ -0.08
RAB3BP20337 HYMAI.1-201ENST00000620949 238 ntBASIC14.56□□□□□ -0.08
RAB3BP20337 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAB3BP20337 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RAB3BP20337 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB3BP20337 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB3BP20337 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB3BP20337 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 AC148477.5-201ENST00000625164 1645 ntBASIC14.55□□□□□ -0.08
RAB3BP20337 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 SNX33P1-201ENST00000592116 1762 ntBASIC14.55□□□□□ -0.08
RAB3BP20337 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3BP20337 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 AL020989.1-201ENST00000422979 469 ntBASIC14.55□□□□□ -0.08
RAB3BP20337 TSPY22P-201ENST00000427496 604 ntBASIC14.55□□□□□ -0.08
RAB3BP20337 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3BP20337 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB3BP20337 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB3BP20337 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RAB3BP20337 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB3BP20337 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB3BP20337 TNRC18P2-201ENST00000417666 2714 ntBASIC14.54□□□□□ -0.08
RAB3BP20337 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB3BP20337 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.54□□□□□ -0.08
RAB3BP20337 AC246785.2-201ENST00000432512 513 ntBASIC14.54□□□□□ -0.08
RAB3BP20337 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3BP20337 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms