Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.71■□□□□ 0.26
HLA-DPA1P20036 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.7■□□□□ 0.26
HLA-DPA1P20036 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 AL513190.1-201ENST00000621254 727 ntBASIC16.7■□□□□ 0.26
HLA-DPA1P20036 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPA1P20036 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 MIR574-201ENST00000385209 96 ntBASIC16.69■□□□□ 0.26
HLA-DPA1P20036 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 AC092474.2-201ENST00000424288 719 ntBASIC16.69■□□□□ 0.26
HLA-DPA1P20036 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 AC092865.6-201ENST00000642101 219 ntBASIC16.69■□□□□ 0.26
HLA-DPA1P20036 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPA1P20036 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 AC006449.5-201ENST00000610658 2098 ntBASIC16.68■□□□□ 0.26
HLA-DPA1P20036 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 AC002056.1-201ENST00000395613 760 ntBASIC16.68■□□□□ 0.26
HLA-DPA1P20036 MIR940-201ENST00000401276 94 ntBASIC16.68■□□□□ 0.26
HLA-DPA1P20036 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 AC040169.1-201ENST00000565382 521 ntBASIC16.68■□□□□ 0.26
HLA-DPA1P20036 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPA1P20036 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms