Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.84■□□□□ 0.29
NFKB1P19838 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NFKB1P19838 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NFKB1P19838 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NFKB1P19838 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NFKB1P19838 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.83■□□□□ 0.28
NFKB1P19838 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.83■□□□□ 0.28
NFKB1P19838 MED15P5-201ENST00000423150 992 ntBASIC16.83■□□□□ 0.28
NFKB1P19838 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NFKB1P19838 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.83■□□□□ 0.28
NFKB1P19838 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.83■□□□□ 0.28
NFKB1P19838 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.83■□□□□ 0.28
NFKB1P19838 AL009183.1-201ENST00000603760 355 ntBASIC16.83■□□□□ 0.28
NFKB1P19838 AL513190.1-201ENST00000621254 727 ntBASIC16.83■□□□□ 0.28
NFKB1P19838 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.83■□□□□ 0.28
NFKB1P19838 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NFKB1P19838 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.83■□□□□ 0.28
NFKB1P19838 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 AC092919.2-201ENST00000623631 1645 ntBASIC16.82■□□□□ 0.28
NFKB1P19838 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NFKB1P19838 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.82■□□□□ 0.28
NFKB1P19838 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 POU5F1P6-201ENST00000466990 990 ntBASIC16.82■□□□□ 0.28
NFKB1P19838 RNA5SP416-201ENST00000516838 111 ntBASIC16.82■□□□□ 0.28
NFKB1P19838 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.82■□□□□ 0.28
NFKB1P19838 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.82■□□□□ 0.28
NFKB1P19838 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.82■□□□□ 0.28
NFKB1P19838 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
NFKB1P19838 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NFKB1P19838 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NFKB1P19838 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.82■□□□□ 0.28
NFKB1P19838 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NFKB1P19838 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NFKB1P19838 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms