Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TPM4P1-201ENST00000436100 807 ntBASIC16.19■□□□□ 0.18
PCNAP12004 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.19■□□□□ 0.18
PCNAP12004 IGHV3-65-201ENST00000523210 341 ntBASIC16.19■□□□□ 0.18
PCNAP12004 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.19■□□□□ 0.18
PCNAP12004 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.19■□□□□ 0.18
PCNAP12004 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.19■□□□□ 0.18
PCNAP12004 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.19■□□□□ 0.18
PCNAP12004 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PCNAP12004 AC117500.6-201ENST00000624871 588 ntBASIC16.19■□□□□ 0.18
PCNAP12004 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.19■□□□□ 0.18
PCNAP12004 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.19■□□□□ 0.18
PCNAP12004 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.19■□□□□ 0.18
PCNAP12004 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.19■□□□□ 0.18
PCNAP12004 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.19■□□□□ 0.18
PCNAP12004 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCNAP12004 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 AC007950.2-201ENST00000615045 2347 ntBASIC16.18■□□□□ 0.18
PCNAP12004 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.18■□□□□ 0.18
PCNAP12004 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 MRPL3P1-201ENST00000400109 1033 ntBASIC16.18■□□□□ 0.18
PCNAP12004 MRPL20P1-201ENST00000400819 433 ntBASIC16.18■□□□□ 0.18
PCNAP12004 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
PCNAP12004 AC093909.1-201ENST00000504731 1122 ntBASIC16.18■□□□□ 0.18
PCNAP12004 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.18■□□□□ 0.18
PCNAP12004 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.18■□□□□ 0.18
PCNAP12004 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.18■□□□□ 0.18
PCNAP12004 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.18■□□□□ 0.18
PCNAP12004 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.18■□□□□ 0.18
PCNAP12004 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 AC013467.2-201ENST00000605472 835 ntBASIC16.18■□□□□ 0.18
PCNAP12004 MIR7706-201ENST00000613747 67 ntBASIC16.18■□□□□ 0.18
PCNAP12004 AC004790.2-201ENST00000623588 572 ntBASIC16.18■□□□□ 0.18
PCNAP12004 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
PCNAP12004 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCNAP12004 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
PCNAP12004 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.18■□□□□ 0.18
PCNAP12004 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCNAP12004 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
PCNAP12004 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCNAP12004 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.17■□□□□ 0.18
PCNAP12004 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCNAP12004 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.17■□□□□ 0.18
PCNAP12004 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 PMS2P1-201ENST00000431037 1228 ntBASIC16.17■□□□□ 0.18
PCNAP12004 AC108073.2-201ENST00000464002 357 ntBASIC16.17■□□□□ 0.18
PCNAP12004 AC107918.2-201ENST00000530817 355 ntBASIC16.17■□□□□ 0.18
PCNAP12004 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.17■□□□□ 0.18
PCNAP12004 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCNAP12004 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.17■□□□□ 0.18
PCNAP12004 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.17■□□□□ 0.18
PCNAP12004 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.17■□□□□ 0.18
PCNAP12004 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCNAP12004 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 CYP2T1P-202ENST00000641596 2535 ntBASIC16.17■□□□□ 0.18
PCNAP12004 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCNAP12004 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCNAP12004 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCNAP12004 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms