Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP1P11387 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TOP1P11387 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
TOP1P11387 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP1P11387 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.42■□□□□ 0.7
TOP1P11387 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.42■□□□□ 0.7
TOP1P11387 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP1P11387 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.42■□□□□ 0.7
TOP1P11387 AC027307.2-201ENST00000591252 911 ntBASIC19.42■□□□□ 0.7
TOP1P11387 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP1P11387 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.42■□□□□ 0.7
TOP1P11387 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 AC009093.7-201ENST00000623853 1223 ntBASIC19.42■□□□□ 0.7
TOP1P11387 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.42■□□□□ 0.7
TOP1P11387 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TOP1P11387 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.42■□□□□ 0.7
TOP1P11387 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TOP1P11387 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TOP1P11387 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 HLA-J-203ENST00000494367 1087 ntBASIC19.41■□□□□ 0.7
TOP1P11387 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 AL138918.1-201ENST00000568306 659 ntBASIC19.41■□□□□ 0.7
TOP1P11387 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.41■□□□□ 0.7
TOP1P11387 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 AC084121.4-201ENST00000641598 221 ntBASIC19.41■□□□□ 0.7
TOP1P11387 AF228730.8-201ENST00000642140 221 ntBASIC19.41■□□□□ 0.7
TOP1P11387 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TOP1P11387 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TOP1P11387 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TOP1P11387 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TOP1P11387 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.4■□□□□ 0.7
TOP1P11387 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 KRT18P32-201ENST00000424695 1287 ntBASIC19.4■□□□□ 0.7
TOP1P11387 FAM58DP-201ENST00000428076 619 ntBASIC19.4■□□□□ 0.7
TOP1P11387 HLA-J-202ENST00000469281 1241 ntBASIC19.4■□□□□ 0.7
TOP1P11387 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.4■□□□□ 0.7
TOP1P11387 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.4■□□□□ 0.7
TOP1P11387 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.4■□□□□ 0.7
TOP1P11387 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.4■□□□□ 0.7
TOP1P11387 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.4■□□□□ 0.7
TOP1P11387 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.4■□□□□ 0.7
TOP1P11387 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.4■□□□□ 0.7
TOP1P11387 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms