Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.24■□□□□ 0.03
THBS1P07996 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 AC009947.1-201ENST00000444350 727 ntBASIC15.24■□□□□ 0.03
THBS1P07996 AL513480.1-201ENST00000451731 511 ntBASIC15.24■□□□□ 0.03
THBS1P07996 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.24■□□□□ 0.03
THBS1P07996 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.24■□□□□ 0.03
THBS1P07996 KRT18P58-201ENST00000527480 1120 ntBASIC15.24■□□□□ 0.03
THBS1P07996 UNC93B6-202ENST00000528242 690 ntBASIC15.24■□□□□ 0.03
THBS1P07996 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.24■□□□□ 0.03
THBS1P07996 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.24■□□□□ 0.03
THBS1P07996 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.24■□□□□ 0.03
THBS1P07996 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
THBS1P07996 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 AC116407.3-201ENST00000623905 1129 ntBASIC15.24■□□□□ 0.03
THBS1P07996 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 REXO1L8P-201ENST00000604378 1897 ntBASIC15.24■□□□□ 0.03
THBS1P07996 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
THBS1P07996 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.24■□□□□ 0.03
THBS1P07996 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
THBS1P07996 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.23■□□□□ 0.03
THBS1P07996 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.23■□□□□ 0.03
THBS1P07996 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.23■□□□□ 0.03
THBS1P07996 CRYGEP-201ENST00000412192 528 ntBASIC15.23■□□□□ 0.03
THBS1P07996 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 IGHV3-22-201ENST00000520721 359 ntBASIC15.23■□□□□ 0.03
THBS1P07996 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.23■□□□□ 0.03
THBS1P07996 AC139530.3-201ENST00000620344 690 ntBASIC15.23■□□□□ 0.03
THBS1P07996 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.23■□□□□ 0.03
THBS1P07996 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
THBS1P07996 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.23■□□□□ 0.03
THBS1P07996 AL365203.3-201ENST00000609742 2057 ntBASIC15.23■□□□□ 0.03
THBS1P07996 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
THBS1P07996 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.23■□□□□ 0.03
THBS1P07996 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms